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The forecasting power of the microbiome.

Sara Correa-Garcia,P. Constant,É. Yergeau

2022 · DOI: 10.1016/j.tim.2022.11.013
Trends in Microbiology · 23 Citations

TLDR

It is suggested that signals in the microbiome data can be used to forecast future ecosystem processes, and the combination of omics with various statistical learning approaches will be key to attain this goal.

Abstract

Microorganisms are informative biological integrators of past and present environmental abiotic and biotic conditions. At the same time, they are directly involved in ecosystem processes. Unfortunately, the complexity of microbial communities has so far resulted in most studies being descriptive. Here, we suggest that signals in the microbiome data can be used to forecast future ecosystem processes. The combination of omics with various statistical learning approaches, selected based on accuracy-interpretability and bias-variance trade-offs, will be key to attain this goal, as exemplified by recent studies. The time is ripe for microbial ecologists to fully exploit the forecasting power of microbiomes.