UPDF AI

Snakemake - a scalable bioinformatics workflow engine

Johannes Köster,S. Rahmann

2018 · DOI: 10.1093/bioinformatics/bty350
1,785 Citations

TLDR

Snakemake is a workflow engine that provides a readable Python-based workflow definition language and a powerful execution environment that scales from single-core workstations to compute clusters without modifying the workflow.