MMseqs software suite for fast and deep clustering and searching of large protein sequence sets
MMseqs software suite for fast and deep clustering and searching of large protein sequence sets
Maria Hauser,Martin Steinegger,J. Söding
2016 · DOI: 10.1093/bioinformatics/btw006
245 Citations
TLDR
In the authors' homology detection benchmarks, MMseqs is much more sensitive and 4-30 times faster than UBLAST and RAPsearch, respectively, although it does not reach BLAST sensitivity yet.